MacSGP analysis

• Simulation study
  • Simulation study
  • Benchmark with other methods
• Visium adult mouse brain datasets containing two biological replicates
  • Cell type deconvolution using MacSGP
  • Applying MacSGP to detect cell-type-specific SGPs
  • Mouse brain dataset analysis
• Visium kidney cancer dataset at the tumour-normal interface
  • Cell type deconvolution using MacSGP
  • Applying MacSGP to detect cell-type-specific SGPs
  • Kidney cancer dataset analysis
• Multiple human colorectal cancer datasets generated by different technologies
  • Applying MacSGP to the 10x Visium CRC dataset
  • Applying MacSGP to the 10x Xenium CRC dataset